STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF57067.1KEGG: rba:RB3293 hypothetical protein. (334 aa)    
Predicted Functional Partners:
EEF63267.1
KEGG: cts:Ctha_0639 hypothetical protein.
  
     0.702
EEF63265.1
KEGG: sus:Acid_6438 hypothetical protein.
  
     0.694
EEF61367.1
Hypothetical protein; KEGG: rba:RB8085 PQQ repeat-containing protein.
  
     0.687
EEF59632.1
PFAM: Pyrrolo-quinoline quinone; KEGG: rba:RB7541 serine/threonine protein kinase related protein.
  
     0.684
EEF59342.1
PFAM: peptidase M48 Ste24p; KEGG: chu:CHU_2164 M48 family peptidase.
  
     0.681
EEF63264.1
TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: cts:Ctha_0978 hypothetical protein.
  
     0.676
EEF61720.1
TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; PFAM: protein of unknown function DUF1080; KEGG: rba:RB3919 signal peptide.
  
     0.675
EEF58532.1
KEGG: lsp:Bsph_1318 hypothetical protein.
  
     0.674
EEF58061.1
PFAM: Pyrrolo-quinoline quinone; KEGG: rba:RB7541 serine/threonine protein kinase related protein.
  
     0.660
EEF59725.1
PFAM: ABC-2 type transporter; KEGG: rba:RB6045 hypothetical protein.
  
     0.658
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.