STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF58600.1PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_1007 hypothetical protein. (320 aa)    
Predicted Functional Partners:
EEF57392.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2880 oxidoreductase domain protein.
  
    0.756
EEF62049.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gur:Gura_2970 putative PTS IIA-like nitrogen-regulatory protein PtsN.
    
  0.705
EEF58156.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cma:Cmaq_1191 oxidoreductase domain protein.
  
    0.681
EEF61123.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sus:Acid_7741 oxidoreductase domain-containing protein.
  
    0.680
EEF59664.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: hch:HCH_05768 dehydrogenase and related protein.
  
    0.679
EEF59617.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tpd:Teth39_0590 oxidoreductase domain-containing protein.
 
    0.678
EEF62473.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ote:Oter_3285 xylose isomerase domain protein TIM barrel.
  
     0.656
EEF59320.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB3239 D-tagatose 3-epimerase.
  
     0.652
EEF62483.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bcl:ABC3276 dehydrogenase.
  
    0.638
EEF62319.1
PFAM: PfkB domain protein; KEGG: ote:Oter_4086 PfkB domain protein.
  
 
  0.597
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.