STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF62233.1PFAM: phosphoesterase PA-phosphatase related; KEGG: mrd:Mrad2831_0282 phosphoesterase PA-phosphatase related. (303 aa)    
Predicted Functional Partners:
EEF58324.1
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: noc:Noc_2380 AMP-dependent synthetase and ligase.
 
 
 0.828
EEF62234.1
PFAM: beta-lactamase; KEGG: gvi:gll3098 similar to penicillin-binding protein.
       0.773
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.701
EEF60006.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein.
   
 0.681
EEF60978.1
Amino acid adenylation domain protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mar:MAE_60000 McnE protein.
   
 0.681
EEF62232.1
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.651
EEF58560.1
PFAM: cytochrome P450; KEGG: bha:BH0579 cytochrome P450 hydroxylase.
    
  0.608
EEF61027.1
PFAM: cytochrome P450; KEGG: hau:Haur_2324 cytochrome P450.
    
  0.608
EEF62231.1
PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: hmo:HM1_2124 hypothetical protein.
       0.523
EEF61958.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; Luciferase-like monooxygenase; KEGG: mxa:MXAN_4532 non-ribosomal peptide synthase.
   
 0.485
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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