STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL07913.1Hypothetical protein. (369 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.969
SDL89455.1
Phosphotransacetylase.
 
  0.966
SDM33579.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.955
SDL60109.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.808
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.736
SDL28578.1
Acetyl-coenzyme A synthetase.
  
  
 0.697
SDL07954.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
       0.651
SDL08034.1
acetyl-CoA decarbonylase/synthase delta subunit.
    
  0.570
SDL08145.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
    
  0.555
SDL19757.1
4Fe-4S dicluster domain-containing protein.
     
 0.527
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.