STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_030775X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family. (511 aa)    
Predicted Functional Partners:
PHYPA_022041
Predicted protein; Belongs to the glycosyl hydrolase 17 family.
    
0.904
PHYPA_030404
Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family.
    
  0.902
PHYPA_028287
Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family.
    
  0.902
PHYPA_008315
Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family.
    
  0.902
PHYPA_029318
Predicted protein; Belongs to the glycosyl hydrolase 3 family.
    
  0.902
PHYPA_021086
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
  
  
 
0.901
PHYPA_028509
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
  0.900
PHYPA_020093
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
  0.900
PHYPA_008874
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
  0.900
PHYPA_003494
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
  0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.