STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_027302Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
PHYPA_021445
Uncharacterized protein.
   
 0.777
PHYPA_001993
Uncharacterized protein.
   
 0.777
PHYPA_018070
Robl_LC7 domain-containing protein.
    
 0.747
PHYPA_029147
Uncharacterized protein.
    
 
 0.668
PHYPA_001465
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.609
PHYPA_024569
Uncharacterized protein.
   
 
 0.579
PHYPA_017129
Dynein light chain.
    
 0.517
PHYPA_030539
Dynein light chain.
    
 0.517
PHYPA_014820
Dynein light chain.
    
 0.517
PHYPA_024666
Dynein light chain.
    
 0.517
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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