STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_008847PlsC domain-containing protein. (427 aa)    
Predicted Functional Partners:
PHYPA_016273
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.925
PHYPA_008460
Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).
     
  0.900
PHYPA_006362
Uncharacterized protein.
     
  0.900
PHYPA_015550
PlsC domain-containing protein.
  
 
0.895
PHYPA_014806
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 0.762
PHYPA_009561
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 0.762
PHYPA_010532
Predicted protein; Belongs to the membrane-bound acyltransferase family.
   
 0.762
PHYPA_027092
Uncharacterized protein.
    
 0.681
PHYPA_025114
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
    
 0.681
PHYPA_022985
Uncharacterized protein.
    
 0.681
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.