STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_004489Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
PHYPA_002794
Uncharacterized protein.
   
 0.905
PHYPA_001019
Uncharacterized protein.
   
 0.905
PHYPA_021724
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.852
PHYPA_024779
Peroxisomal membrane protein PEX16.
   
 
 0.810
PHYPA_020052
Pex14_N domain-containing protein.
    
 0.761
PHYPA_012383
DUF4097 domain-containing protein.
    
 0.761
PHYPA_012971
Pex14_N domain-containing protein.
    
 0.761
PHYPA_018671
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.752
PHYPA_022548
Predicted protein.
    
 0.752
PHYPA_028956
Uncharacterized protein.
   
 0.712
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.