STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_001295Predicted protein. (121 aa)    
Predicted Functional Partners:
PHYPA_000930
Thioredoxin domain-containing protein.
  
 0.736
PHYPA_002762
Thioredoxin domain-containing protein.
  
 0.736
PHYPA_008777
Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.
   
 0.634
PHYPA_007793
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.625
PHYPA_006390
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.623
PHYPA_011353
Thioredoxin reductase.
  
 
 0.581
PHYPA_018697
Uncharacterized protein.
   
 0.567
PHYPA_022291
Calreticulin.
   
 0.567
Per1
Thioredoxin domain-containing protein.
  
 0.562
PHYPA_014209
Predicted protein.
  
 0.562
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.