STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP2A2Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type; Belongs to the syntaxin family. (262 aa)    
Predicted Functional Partners:
PHYPA_030820
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.995
YKT6A1
R-SNARE, YKT6-family; Belongs to the synaptobrevin family.
   
 0.995
PHYPA_014594
t-SNARE coiled-coil homology domain-containing protein.
    
 0.958
SYP5A2
Qc-SNARE, SYP5 family.
    
 0.958
PHYPA_022219
V-SNARE domain-containing protein.
   
 0.957
PHYPA_002432
V-SNARE domain-containing protein.
   
 0.957
VTI1A1
Qb-SNARE, VTI1-family.
   
 0.957
VTI1A3
Qb-SNARE, VTI1-family.
   
 0.957
PHYPA_024461
Predicted protein.
    
 0.947
PHYPA_023149
Predicted protein.
    
 0.946
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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