• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S100_118V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S100_118V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S100_118V6.2Predicted protein; Belongs to the WD repeat SEC13 family (306 aa)    
Predicted Functional Partners:
PP1S281_108V6.1
annotation not available (1167 aa)
     
  0.986
PP1S171_148V6.1
annotation not available (955 aa)
     
  0.986
PP1S315_38V6.3
annotation not available (999 aa)
     
  0.981
PP1S217_84V6.1
Predicted protein (627 aa)
     
  0.981
PP1S104_99V6.2
Predicted protein (751 aa)
     
 
  0.966
PP1S570_1V6.1
annotation not available (1074 aa)
     
  0.965
PP1S358_10V6.1
Predicted protein (1075 aa)
     
  0.965
PP1S36_35V6.1
Predicted protein (493 aa)
     
 
  0.956
PP1S114_56V6.1
Predicted protein (1137 aa)
     
 
  0.947
PP1S332_39V6.1
annotation not available (1535 aa)
     
 
  0.940
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]