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STRINGSTRING
PP1S100_137V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S100_137V6.1" - Endoglucanase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S100_137V6.1Endoglucanase (522 aa)    
Predicted Functional Partners:
PP1S49_195V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (613 aa)
         
  0.658
PP1S309_65V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (629 aa)
         
  0.658
PP1S217_8V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (637 aa)
         
  0.658
PP1S1821_1V6.1
annotation not available (676 aa)
         
  0.658
PP1S9_78V6.1
annotation not available (499 aa)
         
    0.650
PP1S76_8V6.2
Predicted protein; Belongs to the glycosyl hydrolase 1 family (580 aa)
         
    0.650
PP1S39_162V6.1
Predicted protein; Belongs to the glycosyl hydrolase 1 family (514 aa)
         
    0.650
PP1S22_312V6.1
Predicted protein; Belongs to the glycosyl hydrolase 1 family (533 aa)
         
    0.650
PP1S1_726V6.1
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family (530 aa)
         
    0.650
PP1S170_62V6.1
Predicted protein; Belongs to the glycosyl hydrolase 1 family (519 aa)
         
    0.650
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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