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PP1S100_219V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S100_219V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S100_219V6.1Predicted protein (466 aa)    
Predicted Functional Partners:
PP1S210_66V6.1
UDP-N-acetylmuramate-alanine ligase (615 aa)
 
   
  0.896
PP1S89_236V6.1
Predicted protein (382 aa)
 
 
  0.869
MurD
Predicted protein (521 aa)
 
 
  0.821
PP1S92_3V6.1
Predicted protein (606 aa)
 
     
  0.805
PP1S43_232V6.1
Imidazole glycerol phosphate synthase subunit hisF (617 aa)
              0.800
ppabcg6
ATP-binding cassette transporter, subfamily G, member 6, group WBC protein PpABCG6 (675 aa)
              0.800
ppabcg23
ATP-binding cassette transporter, subfamily G, member 23, group PDR protein PpABCG23 (1397 aa)
              0.800
PP1S8097_1V6.1
Predicted protein (345 aa)
 
 
  0.797
PP1S294_43V6.1
Predicted protein (354 aa)
   
   
  0.796
PP1S16_203V6.1
Annotation not available (326 aa)
   
   
  0.796
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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