STRINGSTRING
PP1S101_153V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S101_153V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S101_153V6.1Predicted protein (373 aa)    
Predicted Functional Partners:
PP1S151_27V6.1
Predicted protein (576 aa)
       
  0.971
PP1S80_34V6.1
Predicted protein (847 aa)
     
 
  0.959
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.945
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
  0.939
PP1S94_64V6.1
Annotation not available (108 aa)
     
 
  0.929
PP1S141_10V6.1
Annotation not available (548 aa)
     
 
  0.929
PP1S65_4V6.1
Predicted protein (337 aa)
     
  0.929
PP1S189_64V6.1
Predicted protein (449 aa)
   
  0.917
PP1S14_35V6.1
Predicted protein (305 aa)
   
  0.889
PP1S144_115V6.1
Predicted protein (356 aa)
   
  0.889
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (12%) [HD]