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STRINGSTRING
PP1S101_210V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S101_210V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S101_210V6.1Predicted protein (844 aa)    
Predicted Functional Partners:
PP1S99_113V6.1
annotation not available (537 aa)
     
 
  0.934
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (566 aa)
     
 
  0.934
PP1S51_233V6.1
annotation not available (459 aa)
     
 
  0.929
PP1S102_17V6.1
Predicted protein (617 aa)
     
 
  0.886
PP1S60_116V6.1
Predicted protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family (539 aa)
     
        0.878
PP1S308_21V6.1
Endoglucanase (532 aa)
     
        0.878
PP1S301_39V6.1
Predicted protein (1002 aa)
     
 
0.867
PP1S56_1V6.1
annotation not available (543 aa)
     
        0.867
PP1S13_356V6.1
annotation not available (552 aa)
     
        0.867
PP1S207_37V6.1
Predicted protein (919 aa)
     
 
0.852
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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