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STRINGSTRING
PP1S102_12V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S102_12V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S102_12V6.1Predicted protein (300 aa)    
Predicted Functional Partners:
PP1S54_181V6.1
Predicted protein (291 aa)
     
 
  0.939
PP1S15_442V6.1
Predicted protein (313 aa)
     
 
  0.939
PP1S15_441V6.1
Predicted protein (314 aa)
     
 
  0.939
PP1S235_137V6.1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling (189 aa)
       
      0.845
PP1S68_264V6.1
Predicted protein; Belongs to the fatty acid desaturase type 1 family (397 aa)
     
 
  0.831
PP1S495_13V6.1
Predicted protein; Belongs to the fatty acid desaturase type 1 family (401 aa)
     
 
  0.831
PP1S379_37V6.1
Predicted protein (111 aa)
       
      0.803
PP1S18_313V6.1
Predicted protein (109 aa)
       
      0.803
PP1S20_113V6.1
annotation not available (155 aa)
     
   
  0.698
PP1S30_56V6.1
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long- chain fatty acids elongation cycle. This endoplasmic reticulum- bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursor [...] (220 aa)
     
 
  0.681
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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