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STRINGSTRING
PP1S102_148V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S102_148V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S102_148V6.1Predicted protein (513 aa)    
Predicted Functional Partners:
PP1S64_149V6.1
Predicted protein (625 aa)
     
   
  0.885
PP1S399_34V6.1
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (421 aa)
     
        0.885
PP1S29_213V6.1
Predicted protein (109 aa)
     
        0.885
PP1S258_80V6.1
Predicted protein (109 aa)
     
        0.885
PP1S130_196V6.1
Predicted protein (332 aa)
     
        0.885
PP1S74_243V6.1
annotation not available (1053 aa)
     
        0.880
PP1S74_242V6.1
Predicted protein (398 aa)
     
        0.880
PP1S37_39V6.1
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1067 aa)
     
        0.880
PP1S33_37V6.1
Predicted protein (158 aa)
     
        0.876
PP1S157_38V6.1
Predicted protein (555 aa)
     
        0.871
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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