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STRINGSTRING
PP1S103_117V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S103_117V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S103_117V6.3Predicted protein (397 aa)    
Predicted Functional Partners:
PP1S103_66V6.1
annotation not available (306 aa)
   
        0.930
PP1S186_83V6.1
Predicted protein; Belongs to the ATPase B chain family (253 aa)
   
        0.929
PP1S15_26V6.1
Predicted protein; Belongs to the ATPase B chain family (250 aa)
   
        0.927
PP1S85_113V6.1
Predicted protein (292 aa)
   
        0.927
PP1S273_61V6.1
Predicted protein (266 aa)
   
        0.923
PP1S23_131V6.1
Predicted protein (302 aa)
   
        0.921
PP1S42_208V6.1
Predicted protein (297 aa)
   
        0.916
PP1S123_97V6.1
Predicted protein (300 aa)
   
        0.916
PP1S20_320V6.1
annotation not available (210 aa)
   
        0.905
PP1S228_12V6.1
annotation not available (191 aa)
   
        0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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