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Arl8A2 protein (Physcomitrella patens) - STRING interaction network
"Arl8A2" - Arl8-family small GTPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arl8A2Arl8-family small GTPase ; Belongs to the small GTPase superfamily. Arf family (184 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.864
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.864
PP1S114_147V6.1
Predicted protein (374 aa)
       
 
  0.671
PP1S88_37V6.1
annotation not available (1024 aa)
       
 
  0.652
RabB12
Rab2/RabB-family small GTPase (213 aa)
     
 
  0.651
RabB11
Rab2/RabB-family small GTPase (213 aa)
     
 
  0.651
RabB15
Rab2/RabB-family small GTPase (220 aa)
     
 
  0.651
RabB12.1
Rab2/RabB-family small GTPase (213 aa)
     
 
  0.651
RabB14
Rab2/RabB-family small GTPase (212 aa)
     
 
  0.651
PP1S239_37V6.1
annotation not available (907 aa)
       
 
  0.650
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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