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STRINGSTRING
PP1S104_141V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S104_141V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S104_141V6.1Predicted protein (821 aa)    
Predicted Functional Partners:
PP1S211_20V6.1
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (579 aa)
   
  0.985
PP1S432_10V6.1
Predicted protein (577 aa)
     
 
  0.844
PP1S18_147V6.1
annotation not available (566 aa)
     
 
  0.844
PP1S53_230V6.1
Predicted protein (199 aa)
       
      0.833
PP1S13_205V6.1
Predicted protein (501 aa)
   
   
 
0.804
PP1S34_164V6.1
Predicted protein (153 aa)
     
   
  0.760
PP1S152_87V6.2
Predicted protein (617 aa)
   
 
  0.680
PP1S89_150V6.1
Predicted protein (51 aa)
     
 
  0.639
PP1S104_75V6.1
Predicted protein (51 aa)
     
 
  0.639
PP1S75_41V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1006 aa)
     
   
  0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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