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PP1S104_211V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S104_211V6.1" - Transcription initiation factor IIA subunit 2 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S104_211V6.1Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)    
Predicted Functional Partners:
PP1S111_158V6.1
Predicted protein (73 aa)
     
      0.982
PP1S7_46V6.1
Uncharacterized protein (117 aa)
     
      0.982
PP1S36_15V6.1
annotation not available (183 aa)
     
      0.982
PP1S80_154V6.1
Predicted protein (162 aa)
     
      0.981
PP1S40_204V6.1
Predicted protein (139 aa)
     
   
  0.946
PP1S32_141V6.1
Predicted protein (138 aa)
     
   
  0.946
PP1S154_125V6.1
Predicted protein (98 aa)
     
   
  0.945
PP1S34_263V6.1
Predicted protein (311 aa)
     
 
  0.939
PP1S147_86V6.1
Predicted protein (311 aa)
     
 
  0.939
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
     
 
  0.939
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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