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STRINGSTRING
PP1S105_124V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S105_124V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S105_124V6.1Predicted protein (407 aa)    
Predicted Functional Partners:
PP1S302_56V6.1
annotation not available (1177 aa)
     
   
  0.715
PP1S213_95V6.1
annotation not available (308 aa)
     
   
  0.605
PP1S114_86V6.1
Predicted protein (741 aa)
     
   
  0.604
PP1S184_72V6.1
Predicted protein (828 aa)
     
   
  0.598
PP1S32_124V6.1
Predicted protein (530 aa)
 
   
      0.589
PP1S425_18V6.1
Predicted protein (364 aa)
       
      0.588
PP1S31_322V6.1
40S ribosomal protein S6 ; Belongs to the eukaryotic ribosomal protein eS6 family (249 aa)
       
      0.582
PP1S3195_1V6.1
annotation not available (132 aa)
       
      0.582
PP1S311_33V6.1
40S ribosomal protein S6 ; Belongs to the eukaryotic ribosomal protein eS6 family (249 aa)
       
      0.582
PP1S253_7V6.1
40S ribosomal protein S6 ; Belongs to the eukaryotic ribosomal protein eS6 family (247 aa)
       
      0.582
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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