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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S105_216V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S105_216V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S105_216V6.1Predicted protein (439 aa)    
Predicted Functional Partners:
PP1S3_18V6.1
Predicted protein (372 aa)
     
 
  0.991
PP1S191_77V6.1
Predicted protein (372 aa)
     
 
  0.991
PP1S70_168V6.1
Predicted protein (386 aa)
     
 
  0.985
PP1S58_47V6.1
Predicted protein (386 aa)
     
 
  0.985
PP1S160_63V6.1
annotation not available (186 aa)
     
 
  0.985
PP1S414_22V6.1
Predicted protein (903 aa)
     
 
  0.980
PP1S3_553V6.1
Predicted protein (899 aa)
     
 
  0.980
PP1S58_256V6.1
Predicted protein (452 aa)
     
 
  0.977
PP1S257_89V6.1
Predicted protein (452 aa)
     
 
  0.977
PP1S148_142V6.1
Predicted protein; Inhibitor/interactor of CDK (326 aa)
     
 
  0.977
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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