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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S105_57V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S105_57V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S105_57V6.1Predicted protein (85 aa)    
Predicted Functional Partners:
PP1S39_104V6.1
Predicted protein (744 aa)
     
   
  0.999
PP1S85_99V6.1
annotation not available (130 aa)
       
 
  0.899
PP1S85_98V6.1
annotation not available (823 aa)
       
 
  0.899
PP1S75_200V6.1
annotation not available (833 aa)
       
 
  0.899
PP1S71_279V6.1
annotation not available (898 aa)
       
 
  0.899
PP1S69_245V6.1
Predicted protein (429 aa)
       
 
  0.899
PP1S63_118V6.1
annotation not available (127 aa)
       
 
  0.899
PP1S63_117V6.1
annotation not available (633 aa)
       
 
  0.899
PP1S51_3V6.1
Predicted protein (482 aa)
       
 
  0.899
PP1S44_203V6.1
annotation not available (493 aa)
       
 
  0.899
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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