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STRINGSTRING
PP1S105_77V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S105_77V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S105_77V6.1Predicted protein (1187 aa)    
Predicted Functional Partners:
PP1S313_51V6.1
annotation not available (1252 aa)
           
  0.567
PP1S114_86V6.1
Predicted protein (741 aa)
           
  0.556
PP1S1825_1V6.1
Predicted protein (345 aa)
           
  0.549
PP1S74_84V6.1
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (434 aa)
           
  0.544
PP1S302_56V6.1
annotation not available (1177 aa)
           
  0.528
PP1S17_13V6.1
tRNA (adenine(58)-N(1))-methyltransferase (339 aa)
           
  0.528
PP1S173_64V6.1
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (485 aa)
           
  0.528
PP1S224_78V6.1
Predicted protein (546 aa)
           
  0.522
PP1S142_26V6.1
Predicted protein (491 aa)
           
  0.522
PP1S150_109V6.1
annotation not available (260 aa)
           
  0.520
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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