• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S105_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S105_8V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S105_8V6.1Predicted protein (582 aa)    
Predicted Functional Partners:
PP1S34_156V6.1
annotation not available (637 aa)
           
  0.602
PP1S21_361V6.1
Predicted protein (630 aa)
           
  0.602
PP1S53_224V6.1
Predicted protein (469 aa)
     
   
  0.525
PP1S36_283V6.1
Predicted protein; Belongs to the carbohydrate kinase PfkB family (402 aa)
     
   
  0.525
PP1S276_108V6.1
Predicted protein; Belongs to the carbohydrate kinase PfkB family (412 aa)
     
   
  0.525
PP1S249_95V6.1
Predicted protein; Belongs to the carbohydrate kinase PfkB family (349 aa)
     
   
  0.525
PP1S127_105V6.1
Predicted protein; Belongs to the carbohydrate kinase PfkB family (406 aa)
     
   
  0.525
PP1S172_23V6.1
Predicted protein (305 aa)
           
  0.511
PP1S132_186V6.1
Predicted protein (304 aa)
           
  0.511
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]