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STRINGSTRING
PP1S10636_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S10636_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S10636_1V6.1Predicted protein (203 aa)    
Predicted Functional Partners:
PP1S11710_1V6.1
Predicted protein (200 aa)
 
 
 
  0.969
PP1S10965_1V6.1
Predicted protein (322 aa)
 
 
  0.969
PP1S2891_3V6.1
annotation not available (234 aa)
 
 
  0.856
PP1S9287_1V6.1
Predicted protein (168 aa)
     
 
  0.650
PP1S2988_2V6.1
Predicted protein (278 aa)
     
 
  0.650
PP1S1924_1V6.1
Predicted protein (1047 aa)
         
  0.642
PP1S105_45V6.1
Predicted protein (590 aa)
         
  0.635
PP1S13_388V6.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (639 aa)
         
  0.624
PP1S1_254V6.1
Uncharacterized protein (412 aa)
         
  0.611
PP1S7_147V6.3
Alpha-amylase (485 aa)
         
  0.602
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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