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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S106_40V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S106_40V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S106_40V6.1annotation not available (654 aa)    
Predicted Functional Partners:
DRB1501
Double-stranded RNA binding protein (441 aa)
       
 
  0.962
PP1S105_41V6.3
annotation not available (254 aa)
     
 
  0.955
PP1S41_19V6.1
Predicted protein (874 aa)
     
 
  0.947
PP1S14_125V6.1
Predicted protein (881 aa)
     
 
  0.947
PP1S36_86V6.1
annotation not available (768 aa)
     
 
  0.902
PP1S294_1V6.1
Predicted protein (534 aa)
     
        0.885
PpDCL1b
annotation not available (778 aa)
     
 
  0.884
PpDCL1a
DsRNA-specific nuclease dicer and related ribonuclease ; Belongs to the helicase family. Dicer subfamily (1866 aa)
     
 
  0.884
PP1S196_67V6.1
Predicted protein (473 aa)
     
 
  0.884
PP1S73_18V6.1
Predicted protein (742 aa)
     
        0.876
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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