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STRINGSTRING
PP1S10785_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S10785_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S10785_1V6.1Predicted protein (328 aa)    
Predicted Functional Partners:
PP1S126_106V6.1
Predicted protein (698 aa)
     
 
  0.917
PP1S270_57V6.1
Predicted protein (296 aa)
   
   
  0.810
PP1S23_46V6.2
Predicted protein (445 aa)
   
 
  0.686
PP1S180_13V6.1
Predicted protein (443 aa)
   
 
  0.686
PP1S166_112V6.3
Predicted protein (323 aa)
   
 
  0.686
PP1S3980_1V6.1
Predicted protein (214 aa)
         
  0.679
PP1S6496_2V6.1
Predicted protein (206 aa)
         
  0.648
PP1S75_75V6.1
Predicted protein (549 aa)
   
   
  0.644
PP1S449_20V6.1
Nitrate transporter (548 aa)
   
   
  0.644
PP1S254_65V6.1
Predicted protein (517 aa)
   
   
  0.644
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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