STRINGSTRING
PP1S107_26V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S107_26V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S107_26V6.1Predicted protein (280 aa)    
Predicted Functional Partners:
PP1S72_86V6.1
annotation not available (148 aa)
       
      0.802
HTA1503
Histone H2A (148 aa)
       
      0.802
HTA1511
Histone H2A (140 aa)
       
      0.802
PP1S47_181V6.1
Histone H2A (132 aa)
       
      0.802
HTA1510
annotation not available (68 aa)
       
      0.802
HTA1508
Predicted protein; Histone H2A (740 aa)
       
      0.802
HTA1505
Histone H2A (140 aa)
       
      0.802
HTA1507
Histone H2A (139 aa)
       
      0.802
HTA1509
Histone H2A (132 aa)
       
      0.802
HTA1504
Histone H2A (148 aa)
       
      0.802
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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