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PP1S107_54V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S107_54V6.1" - 3-oxoacyl-[acyl-carrier-protein] synthase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S107_54V6.13-oxoacyl-[acyl-carrier-protein] synthase ; Belongs to the beta-ketoacyl-ACP synthases family (461 aa)    
Predicted Functional Partners:
PP1S40_304V6.1
Predicted protein (393 aa)
 
  0.989
PP1S87_63V6.1
Predicted protein (424 aa)
 
 
  0.979
PP1S11_305V6.1
Predicted protein (424 aa)
 
 
  0.979
PP1S119_22V6.2
Predicted protein (424 aa)
 
 
  0.978
PP1S99_59V6.3
Predicted protein (398 aa)
   
  0.952
PP1S29_256V6.1
Predicted protein (393 aa)
   
  0.952
PP1S336_57V6.1
Predicted protein (693 aa)
     
   
  0.916
PP1S109_238V6.1
Predicted protein (328 aa)
 
  0.905
PP1S33_206V6.3
Predicted protein (330 aa)
 
  0.904
PP1S136_120V6.1
Predicted protein (494 aa)
     
   
  0.888
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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