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PP1S108_163V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S108_163V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S108_163V6.1Predicted protein (663 aa)    
Predicted Functional Partners:
ppabcd5
ATP-binding cassette transporter, subfamily D, member 5, group PMP protein PpABCD5 (1383 aa)
     
 
  0.950
ppabcd6
ATP-binding cassette transporter, subfamily D, member 6, group PMP protein PpABCD6 (1342 aa)
     
 
  0.950
PP1S150_16V6.1
Predicted protein (763 aa)
     
 
  0.948
PP1S60_178V6.1
Predicted protein (319 aa)
   
   
  0.938
PP1S54_102V6.1
Predicted protein (169 aa)
   
   
  0.938
PP1S127_24V6.1
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (277 aa)
     
   
  0.874
PP1S25_162V6.1
Predicted protein (482 aa)
   
 
  0.865
PP1S186_65V6.1
Predicted protein (735 aa)
   
0.856
PP1S475_12V6.1
Predicted protein (697 aa)
   
0.856
PP1S209_135V6.1
Acyl-coenzyme A oxidase ; Belongs to the acyl-CoA oxidase family (667 aa)
   
 
  0.788
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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