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STRINGSTRING
PP1S109_107V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S109_107V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S109_107V6.1annotation not available (310 aa)    
Predicted Functional Partners:
PP1S80_59V6.1
Predicted protein (578 aa)
       
      0.594
PP1S135_111V6.1
Predicted protein (720 aa)
       
      0.594
PP1S165_48V6.1
Predicted protein (252 aa)
           
  0.528
PP1S109_267V6.2
Predicted protein; Belongs to the glycosyl hydrolase 31 family (927 aa)
           
  0.521
PP1S228_21V6.1
Predicted protein; Belongs to the AAA ATPase family (566 aa)
           
  0.511
PP1S267_85V6.1
Predicted protein (387 aa)
           
  0.457
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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