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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S109_32V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S109_32V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S109_32V6.1annotation not available (434 aa)    
Predicted Functional Partners:
PP1S13_387V6.1
Predicted protein (232 aa)
 
 
  0.864
PP1S79_76V6.2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
     
   
  0.635
Nia1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.635
PP1S58_249V6.1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.635
PP1S4979_1V6.1
Arginase; Belongs to the arginase family (299 aa)
         
  0.525
PP1S147_97V6.1
annotation not available (284 aa)
     
   
  0.502
PP1S143_133V6.3
annotation not available (790 aa)
     
   
  0.502
PP1S133_58V6.1
Predicted protein (618 aa)
     
   
  0.502
PP1S34_250V6.1
Predicted protein (540 aa)
     
   
  0.500
PP1S171_59V6.1
Predicted protein (612 aa)
     
   
  0.500
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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