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STRINGSTRING
PP1S10_203V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S10_203V6.1" - GTP-binding nuclear protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S10_203V6.1GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)    
Predicted Functional Partners:
PP1S462_12V6.1
Predicted protein (86 aa)
     
 
  0.990
PP1S108_24V6.1
Predicted protein (1001 aa)
     
  0.985
PP1S75_164V6.2
Predicted protein (140 aa)
     
 
  0.961
PP1S11_51V6.1
annotation not available (46 aa)
     
 
  0.961
PP1S11_49V6.1
Predicted protein (123 aa)
     
 
  0.961
PP1S119_54V6.1
Predicted protein (123 aa)
     
 
  0.961
PP1S25_241V6.2
Predicted protein (214 aa)
     
 
  0.958
PP1S217_25V6.1
Predicted protein (216 aa)
     
 
  0.958
PP1S1_845V6.1
Uncharacterized protein (395 aa)
     
 
  0.958
PP1S158_50V6.1
Predicted protein (218 aa)
     
 
  0.958
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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