STRINGSTRING
PP1S10_249V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S10_249V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S10_249V6.1Annotation not available (402 aa)    
Predicted Functional Partners:
PP1S357_57V6.1
Serine/threonine-protein phosphatase (306 aa)
       
      0.647
PP1S6_446V6.1
Predicted protein (170 aa)
     
   
  0.493
PP1S4_323V6.1
Predicted protein (177 aa)
     
   
  0.493
PP1S168_104V6.1
Predicted protein (417 aa)
     
   
  0.493
PP1S245_93V6.1
Annotation not available (977 aa)
           
  0.465
PP1S88_179V6.1
Serine/threonine-protein phosphatase (313 aa)
       
      0.447
PP1S81_198V6.1
Serine/threonine-protein phosphatase (311 aa)
       
      0.447
PP1S36_220V6.1
Predicted protein (494 aa)
           
  0.414
PP1S16_315V6.1
Annotation not available (487 aa)
           
  0.414
VPE-gamma
Predicted protein (495 aa)
           
  0.414
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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