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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S111_53V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S111_53V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S111_53V6.2Predicted protein (445 aa)    
Predicted Functional Partners:
PP1S255_4V6.1
Predicted protein (860 aa)
     
   
  0.999
PP1S54_101V6.1
Predicted protein (285 aa)
     
   
  0.882
PP1S197_89V6.1
Predicted protein (288 aa)
     
   
  0.882
PP1S509_22V6.2
Predicted protein (1030 aa)
     
   
  0.784
PP1S26_23V6.1
Predicted protein (1029 aa)
     
   
  0.784
PP1S281_89V6.1
Predicted protein (158 aa)
     
   
  0.760
PP1S1_532V6.1
Uncharacterized protein (715 aa)
     
   
  0.760
PP1S159_2V6.1
annotation not available (464 aa)
     
   
  0.756
PP1S110_13V6.1
Predicted protein (457 aa)
     
   
  0.756
ycf1
Protein TIC 214; Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope (156 aa)
           
  0.745
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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