STRINGSTRING
PP1S112_185V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S112_185V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S112_185V6.1Predicted protein (436 aa)    
Predicted Functional Partners:
PP1S58_96V6.1
Predicted protein (433 aa)
   
 
      0.480
PP1S397_37V6.1
Predicted protein; Belongs to the protein kinase superfamily (303 aa)
   
      0.471
PP1S36_177V6.1
Predicted protein; Belongs to the protein kinase superfamily (302 aa)
   
      0.470
PP1S214_1V6.1
Predicted protein; Belongs to the protein kinase superfamily (306 aa)
   
      0.469
CDKB
Cyclin-dependent kinase B;1; Predicted protein ; Belongs to the protein kinase superfamily (308 aa)
   
      0.467
PP1S7_256V6.1
annotation not available (364 aa)
   
      0.455
PP1S193_68V6.1
annotation not available (343 aa)
   
      0.455
cpk18
Cpk18 calcium-dependent protein kinase (589 aa)
   
      0.447
cpk19
Cpk19 calcium-dependent protein kinase (549 aa)
   
      0.447
cpk17
Cpk17 calcium-dependent protein kinase ; Belongs to the protein kinase superfamily (496 aa)
   
      0.447
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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