STRINGSTRING
PP1S113_29V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S113_29V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S113_29V6.2Predicted protein (343 aa)    
Predicted Functional Partners:
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
         
  0.682
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
         
  0.682
PP1S295_67V6.1
Predicted protein (391 aa)
   
        0.523
PP1S9_388V6.1
Annotation not available (362 aa)
              0.512
PP1S98_70V6.1
Predicted protein (322 aa)
              0.512
PP1S90_103V6.1
Annotation not available (1002 aa)
              0.512
PP1S84_202V6.1
Predicted protein (327 aa)
              0.512
PP1S72_274V6.1
Predicted protein (471 aa)
              0.512
PP1S6_238V6.1
Predicted protein (285 aa)
              0.512
PP1S66_181V6.1
Predicted protein (262 aa)
              0.512
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (2%) [HD]