STRINGSTRING
PP1S114_118V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S114_118V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S114_118V6.1Predicted protein (679 aa)    
Predicted Functional Partners:
PP1S69_177V6.1
Predicted protein (637 aa)
           
  0.747
PP1S130_294V6.1
annotation not available (687 aa)
           
  0.685
PP1S6_172V6.1
annotation not available (419 aa)
           
  0.649
PP1S60_184V6.1
annotation not available (344 aa)
           
  0.649
PP1S1_661V6.3
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Methylthioribulose-1-phosphate dehydratase Enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family (505 aa)
   
   
  0.596
PP1S90_77V6.1
Predicted protein (454 aa)
           
  0.529
PP1S338_21V6.1
annotation not available (420 aa)
           
  0.529
PP1S329_26V6.1
Predicted protein (451 aa)
           
  0.529
PP1S245_39V6.1
Predicted protein (411 aa)
           
  0.529
PP1S170_74V6.1
Predicted protein (498 aa)
           
  0.529
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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