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STRINGSTRING
PP1S114_137V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S114_137V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S114_137V6.1Predicted protein (699 aa)    
Predicted Functional Partners:
PP1S25_63V6.1
Predicted protein (770 aa)
           
  0.685
PP1S253_27V6.1
Predicted protein (1006 aa)
           
  0.663
PP1S30_182V6.1
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1026 aa)
           
  0.650
PP1S342_20V6.1
Predicted protein (956 aa)
           
  0.618
PP1S100_191V6.1
Predicted protein (968 aa)
           
  0.618
PP1S8_70V6.1
Predicted protein (1420 aa)
           
  0.572
PP1S74_185V6.1
Predicted protein (1424 aa)
           
  0.572
PP1S36_295V6.1
Predicted protein (99 aa)
           
  0.565
PP1S33_52V6.1
Predicted protein (102 aa)
           
  0.565
PP1S286_22V6.1
Predicted protein (102 aa)
           
  0.565
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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