STRINGSTRING
N3 protein (Physcomitrella patens) - STRING interaction network
"N3" - KANADI 3 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N3KANADI 3 (485 aa)    
Predicted Functional Partners:
HB10
Predicted protein (871 aa)
           
  0.476
PP1S67_107V6.1
Class III HD-Zip protein HB13 (1010 aa)
           
  0.476
PP1S55_99V6.1
Class III HD-Zip protein HB11 (880 aa)
           
  0.476
PP1S188_95V6.1
Class III HD-Zip protein HB14 (875 aa)
           
  0.476
PP1S15_11V6.1
Class III HD-Zip protein HB12 (858 aa)
           
  0.476
SGS1501
Suppressor of silencing (725 aa)
           
  0.468
PpAGO1b
Argonaute family member (1173 aa)
           
  0.407
PpLFY2
FLORICAULA/LEAFY homolog 2Predicted protein (349 aa)
           
  0.407
PPLFY1
FLORICAULA/LEAFY homolog 1Predicted protein (348 aa)
           
  0.407
PP1S351_7V6.1
Annotation not available (578 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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