STRINGSTRING
PP1S114_172V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S114_172V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S114_172V6.1Predicted protein (129 aa)    
Predicted Functional Partners:
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (162 aa)
       
 
  0.541
PP1S341_24V6.1
Predicted protein (166 aa)
     
 
  0.536
PP1S159_111V6.1
Predicted protein (593 aa)
     
   
  0.533
PP1S110_47V6.1
Predicted protein (594 aa)
     
   
  0.533
PSBS
Photosystem II 22kDa chloroplast protein (280 aa)
     
   
  0.488
PP1S77_69V6.1
Predicted protein (210 aa)
     
   
  0.449
PP1S4_321V6.1
Predicted protein (210 aa)
     
   
  0.449
PP1S1_788V6.1
Predicted protein (217 aa)
     
   
  0.449
PP1S107_188V6.1
Predicted protein (217 aa)
     
   
  0.449
PP1S123_43V6.1
Predicted protein (257 aa)
     
   
  0.445
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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