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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S114_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S114_64V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S114_64V6.1annotation not available (231 aa)    
Predicted Functional Partners:
PP1S234_38V6.1
annotation not available (1163 aa)
     
 
  0.951
PP1S32_143V6.1
Mannosyltransferase (610 aa)
     
   
  0.867
PP1S68_166V6.1
annotation not available (983 aa)
       
 
  0.851
PP1S189_73V6.1
Predicted protein (677 aa)
       
      0.833
PP1S12_340V6.1
Predicted protein (546 aa)
     
   
  0.788
PP1S478_15V6.1
Mannosyltransferase (585 aa)
           
  0.770
PP1S325_17V6.1
annotation not available (1077 aa)
       
 
  0.739
PP1S58_115V6.1
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (508 aa)
           
  0.686
PP1S401_17V6.1
annotation not available (645 aa)
     
 
  0.678
PP1S83_95V6.1
annotation not available (380 aa)
           
  0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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