STRINGSTRING
PP1S114_86V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S114_86V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S114_86V6.1Predicted protein (741 aa)    
Predicted Functional Partners:
PP1S58_120V6.1
Predicted protein (122 aa)
     
 
  0.980
PP1S144_14V6.1
Predicted protein (735 aa)
     
 
  0.772
PP1S78_28V6.1
Predicted protein (288 aa)
       
 
  0.720
HAG1502
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase (569 aa)
     
   
  0.626
PP1S167_46V6.1
Annotation not available (552 aa)
     
   
  0.626
PP1S15_233V6.1
Predicted protein (715 aa)
     
   
  0.626
PP1S12_309V6.1
Predicted protein (495 aa)
     
   
  0.626
CTU1
Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (348 aa)
     
 
  0.625
PP1S34_86V6.1
Annotation not available (492 aa)
     
   
  0.616
PP1S258_50V6.1
Predicted protein (511 aa)
     
   
  0.615
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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