STRINGSTRING
PP1S115_128V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S115_128V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S115_128V6.1annotation not available (584 aa)    
Predicted Functional Partners:
PP1S25_350V6.1
Predicted protein (358 aa)
       
      0.618
PP1S139_46V6.1
Predicted protein (457 aa)
       
      0.618
PP1S3_254V6.1
Predicted protein (765 aa)
       
 
  0.607
PP1S369_16V6.1
Predicted protein (659 aa)
       
 
  0.607
PP1S312_50V6.1
Predicted protein (566 aa)
       
      0.596
PP1S149_123V6.1
annotation not available (568 aa)
           
  0.534
PP1S218_51V6.1
annotation not available (479 aa)
       
 
  0.526
TAFV1501
TFIID and SAGA complex subunit (673 aa)
       
 
  0.521
PP1S256_11V6.1
Predicted protein (302 aa)
           
  0.521
PP1S13_201V6.1
annotation not available (306 aa)
           
  0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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