STRINGSTRING
PP1S116_192V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S116_192V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S116_192V6.1Annotation not available (194 aa)    
Predicted Functional Partners:
PP1S56_2V6.1
Annotation not available (704 aa)
       
 
  0.804
PP1S27_49V6.1
Predicted protein (841 aa)
       
 
0.694
PP1S13_360V6.1
Predicted protein (744 aa)
       
 
0.693
PP1S39_232V6.1
Predicted protein (932 aa)
       
 
0.693
PP1S227_24V6.1
Predicted protein (628 aa)
       
 
0.693
PP1S407_24V6.1
Predicted protein (865 aa)
       
 
0.691
PP1S17_276V6.1
Annotation not available (279 aa)
   
 
 
  0.437
PP1S222_6V6.1
Predicted protein (1050 aa)
     
      0.409
PP1S2_244V6.1
Annotation not available (228 aa)
   
 
 
  0.402
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]