STRINGSTRING
PP1S116_33V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S116_33V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S116_33V6.1Predicted protein (184 aa)    
Predicted Functional Partners:
PP1S66_287V6.1
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (779 aa)
     
   
  0.476
PP1S136_41V6.1
Predicted protein (432 aa)
     
   
  0.467
PP1S332_23V6.1
Predicted protein (323 aa)
     
   
  0.442
PP1S45_263V6.1
Predicted protein; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (131 aa)
           
  0.438
PP1S456_25V6.1
Predicted protein; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (114 aa)
           
  0.438
PP1S79_221V6.1
Signal recognition particle 9 kDa protein (103 aa)
           
  0.407
PpLFY2
FLORICAULA/LEAFY homolog 2Predicted protein (349 aa)
           
  0.407
PPLFY1
FLORICAULA/LEAFY homolog 1Predicted protein (348 aa)
           
  0.407
PP1S243_61V6.1
Signal recognition particle 9 kDa protein (103 aa)
           
  0.407
PP1S136_203V6.1
Annotation not available (567 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (8%) [HD]