STRINGSTRING
PP1S116_54V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S116_54V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
PP1S116_54V6.1Predicted protein (643 aa)    
Predicted Functional Partners:
PP1S80_58V6.1
Predicted protein (264 aa)
     
      0.647
PP1S61_228V6.1
Predicted protein (321 aa)
     
      0.647
PP1S61_215V6.1
Predicted protein (321 aa)
     
      0.647
PP1S2_788V6.1
Predicted protein (322 aa)
     
      0.647
PP1S263_14V6.1
Annotation not available (314 aa)
       
      0.647
PP1S215_6V6.2
Predicted protein (279 aa)
       
      0.647
PP1S194_12V6.1
Predicted protein (278 aa)
       
      0.647
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
     
 
  0.627
PP1S8_304V6.1
Predicted protein (455 aa)
       
      0.552
PP1S1_152V6.1
Predicted protein (447 aa)
       
      0.552
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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