STRINGSTRING
PP1S117_149V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S117_149V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S117_149V6.1Predicted protein (693 aa)    
Predicted Functional Partners:
PP1S57_170V6.1
Predicted protein (286 aa)
           
  0.680
PP1S22_274V6.1
Predicted protein (263 aa)
     
   
  0.602
PP1S10_401V6.1
Purple acid phosphatase (435 aa)
           
  0.560
PP1S88_59V6.2
Predicted protein (202 aa)
           
  0.528
PP1S402_51V6.1
Predicted protein (451 aa)
           
  0.528
PP1S62_227V6.1
annotation not available (244 aa)
           
  0.526
PP1S196_44V6.2
Predicted protein (257 aa)
           
  0.526
PP1S97_64V6.1
Uncharacterized protein (822 aa)
           
  0.522
PP1S39_139V6.1
Predicted protein (645 aa)
           
  0.522
PP1S128_133V6.1
Predicted protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family (501 aa)
           
  0.519
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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